Dca30323.1
Annotation
- 3-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3024)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30323.1 |
65 |
206 |
206 |
30.09 |
142 |
44 |
4e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
330 |
471 |
764 |
18.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30323.1 |
65 |
206 |
206 |
24.27 |
142 |
35 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
164 |
309 |
421 |
34.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3024 |
Augustus |
mRNA |
19232 |
20509 |
. |
+ |
. |
ID=Dca30323.1;Parent=Dca30323 |
| scaffold3024 |
Augustus |
exon |
19232 |
19269 |
. |
+ |
. |
ID=Dca30323.1.exon1;Parent=Dca30323.1 |
| scaffold3024 |
Augustus |
exon |
19364 |
19425 |
. |
+ |
. |
ID=Dca30323.1.exon2;Parent=Dca30323.1 |
| scaffold3024 |
Augustus |
exon |
19989 |
20509 |
. |
+ |
. |
ID=Dca30323.1.exon3;Parent=Dca30323.1 |
