Dca30336.1
Annotation
- 2-exons
- f-1
- sp|Q9FIC5_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3027)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30336.1 |
1 |
434 |
434 |
44.47 |
434 |
39 |
7e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FIC5_ARATH |
563 |
1039 |
1462 |
32.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30336.1 |
309 |
434 |
434 |
11.29 |
126 |
39 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
60 |
185 |
1262 |
9.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3027 |
Augustus |
mRNA |
15464 |
16885 |
. |
+ |
. |
ID=Dca30336.1;Parent=Dca30336 |
| scaffold3027 |
Augustus |
exon |
15464 |
15850 |
. |
+ |
. |
ID=Dca30336.1.exon1;Parent=Dca30336.1 |
| scaffold3027 |
Augustus |
exon |
15968 |
16885 |
. |
+ |
. |
ID=Dca30336.1.exon2;Parent=Dca30336.1 |
