Dca3040.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G7ZV87_MEDTR#Multiple C2 and transmembrane domain-containing protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_021s0014#GO:0016021#0F0P1C
- Repeat List (scaffold11060)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3040.1 |
105 |
204 |
589 |
6.96 |
100 |
41 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
108 |
1717 |
5.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3040.1 |
254 |
346 |
589 |
5.26 |
93 |
34 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11060 |
Augustus |
mRNA |
11720 |
15842 |
. |
- |
. |
ID=Dca3040.1;Parent=Dca3040 |
| scaffold11060 |
Augustus |
exon |
11720 |
12873 |
. |
- |
. |
ID=Dca3040.1.exon1;Parent=Dca3040.1 |
| scaffold11060 |
Augustus |
exon |
13570 |
14060 |
. |
- |
. |
ID=Dca3040.1.exon2;Parent=Dca3040.1 |
| scaffold11060 |
Augustus |
exon |
15334 |
15421 |
. |
- |
. |
ID=Dca3040.1.exon3;Parent=Dca3040.1 |
| scaffold11060 |
Augustus |
exon |
15806 |
15842 |
. |
- |
. |
ID=Dca3040.1.exon4;Parent=Dca3040.1 |
