Dca3042.1
Annotation
- 2-exons
- f-1
- sp|Q9SKF9_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g12920#GO:0003676#1F0P0C
- Repeat List (scaffold11061)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3042.1 |
6 |
106 |
106 |
47.16 |
101 |
50 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SKF9_ARATH |
368 |
464 |
863 |
11.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3042.1 |
14 |
102 |
106 |
24.52 |
89 |
30 |
8e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
252 |
334 |
591 |
14.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11061 |
Augustus |
mRNA |
3859 |
4273 |
. |
- |
. |
ID=Dca3042.1;Parent=Dca3042 |
| scaffold11061 |
Augustus |
exon |
3859 |
4150 |
. |
- |
. |
ID=Dca3042.1.exon1;Parent=Dca3042.1 |
| scaffold11061 |
Augustus |
exon |
4245 |
4273 |
. |
- |
. |
ID=Dca3042.1.exon2;Parent=Dca3042.1 |
