Carnation DB

Dca30470.1

Annotation

5-exons
f-1
sp|A9PD43_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_734661#GO:0016881;GO:0005524#2F0P0C
Os06t0660700-02 Similar to Ubiquitin carrier protein.
Repeat List (scaffold3042)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30470.1	1	253	253	76.28	253	73	2e-102
Target_name	Start	End	Length	Cov(%)
sp\|A9PD43_POPTR	4	264	264	98.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30470.1	1	253	253	73.51	253	73	3e-100
Target_name	Start	End	Length	Cov(%)
Os06t0660700-02	32	282	283	88.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3042	Augustus	mRNA	8700	10063	.	+	.	ID=Dca30470.1;Parent=Dca30470
scaffold3042	Augustus	exon	8700	8844	.	+	.	ID=Dca30470.1.exon1;Parent=Dca30470.1
scaffold3042	Augus-PASA	exon	8982	9059	.	+	.	ID=Dca30470.1.exon2;Parent=Dca30470.1
scaffold3042	Augus-PASA	exon	9326	9438	.	+	.	ID=Dca30470.1.exon3;Parent=Dca30470.1
scaffold3042	Augus-PASA	exon	9534	9637	.	+	.	ID=Dca30470.1.exon4;Parent=Dca30470.1
scaffold3042	Augus-PASA	exon	9742	10063	.	+	.	ID=Dca30470.1.exon5;Parent=Dca30470.1