Dca3049.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold1107)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3049.1 |
6 |
295 |
505 |
21.58 |
290 |
38 |
9e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
295 |
1717 |
16.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3049.1 |
297 |
425 |
505 |
7.92 |
129 |
32 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
62 |
189 |
192 |
66.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1107 |
Augustus |
mRNA |
15782 |
17893 |
. |
- |
. |
ID=Dca3049.1;Parent=Dca3049 |
| scaffold1107 |
Augustus |
exon |
15782 |
16443 |
. |
- |
. |
ID=Dca3049.1.exon1;Parent=Dca3049.1 |
| scaffold1107 |
Augustus |
exon |
17038 |
17893 |
. |
- |
. |
ID=Dca3049.1.exon2;Parent=Dca3049.1 |
