Carnation DB

Dca30502.1

Annotation

7-exons
f-1
sp|B9H3K2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_714306#GO:0005524;GO:0004672#2F0P0C
sp|B9SR97_RICCO#Ubiquinone biosynthesis protein coq-8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0113190#GO:0016772#1F0P0C
Repeat List (scaffold3047)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30502.1	214	339	340	20.29	126	55	5e-34
Target_name	Start	End	Length	Cov(%)
sp\|B9H3K2_POPTR	302	401	438	22.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30502.1	214	338	340	19.11	125	52	1e-30
Target_name	Start	End	Length	Cov(%)
Os11t0549635-00	292	390	553	17.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3047	Augustus	mRNA	17973	25678	.	-	.	ID=Dca30502.1;Parent=Dca30502
scaffold3047	Augustus	exon	17973	18356	.	-	.	ID=Dca30502.1.exon1;Parent=Dca30502.1
scaffold3047	Augustus	exon	21768	21845	.	-	.	ID=Dca30502.1.exon2;Parent=Dca30502.1
scaffold3047	Augustus	exon	22703	22796	.	-	.	ID=Dca30502.1.exon3;Parent=Dca30502.1
scaffold3047	Augustus	exon	23161	23231	.	-	.	ID=Dca30502.1.exon4;Parent=Dca30502.1
scaffold3047	Augustus	exon	23344	23484	.	-	.	ID=Dca30502.1.exon5;Parent=Dca30502.1
scaffold3047	Augustus	exon	25318	25401	.	-	.	ID=Dca30502.1.exon6;Parent=Dca30502.1
scaffold3047	Augustus	exon	25508	25678	.	-	.	ID=Dca30502.1.exon7;Parent=Dca30502.1