Carnation DB

Dca30544.1

Annotation

5-exons
f-1
sp|Q93XJ1_SALGI#Pectate lyase#Salix gilgiana (Willow)#Name=SgPL1#GO:0016829#1F0P0C
Repeat List (scaffold3052)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30544.1	16	403	403	78.16	388	81	0
Target_name	Start	End	Length	Cov(%)
sp\|Q93XJ1_SALGI	22	409	409	94.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30544.1	17	403	403	78.66	387	82	0
Target_name	Start	End	Length	Cov(%)
AT1G67750.1	22	408	408	94.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3052	Augustus	mRNA	12596	14522	.	+	.	ID=Dca30544.1;Parent=Dca30544
scaffold3052	Augustus	exon	12596	12705	.	+	.	ID=Dca30544.1.exon1;Parent=Dca30544.1
scaffold3052	Augustus	exon	12883	13241	.	+	.	ID=Dca30544.1.exon2;Parent=Dca30544.1
scaffold3052	Augustus	exon	13571	13952	.	+	.	ID=Dca30544.1.exon3;Parent=Dca30544.1
scaffold3052	Augustus	exon	14047	14185	.	+	.	ID=Dca30544.1.exon4;Parent=Dca30544.1
scaffold3052	Augustus	exon	14301	14522	.	+	.	ID=Dca30544.1.exon5;Parent=Dca30544.1