Dca30554.1
Annotation
- 2-exons
- f-1
- sp|Q2QZY6_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g44400#GO:0008234;GO:0003676;GO:0015074;GO:0006508#2F2P0C
- Repeat List (scaffold30536)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30554.1 |
6 |
207 |
207 |
44.44 |
202 |
45 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QZY6_ORYSJ |
146 |
336 |
1935 |
9.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30554.1 |
108 |
207 |
207 |
23.18 |
100 |
48 |
3e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
641 |
741 |
1428 |
7.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30536 |
Augustus |
mRNA |
1 |
1123 |
. |
- |
. |
ID=Dca30554.1;Parent=Dca30554 |
| scaffold30536 |
Augustus |
exon |
1 |
308 |
. |
- |
. |
ID=Dca30554.1.exon1;Parent=Dca30554.1 |
| scaffold30536 |
Augustus |
exon |
811 |
1123 |
. |
- |
. |
ID=Dca30554.1.exon2;Parent=Dca30554.1 |
