Dca30602.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold306)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30602.1 |
27 |
1199 |
1231 |
50.12 |
1173 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
9 |
1199 |
1501 |
79.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30602.1 |
363 |
1199 |
1231 |
24.69 |
837 |
37 |
2e-149
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
413 |
1192 |
1539 |
50.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold306 |
Augustus |
mRNA |
173232 |
184061 |
. |
- |
. |
ID=Dca30602.1;Parent=Dca30602 |
| scaffold306 |
Augustus |
exon |
173232 |
173330 |
. |
- |
. |
ID=Dca30602.1.exon1;Parent=Dca30602.1 |
| scaffold306 |
Augustus |
exon |
180465 |
184061 |
. |
- |
. |
ID=Dca30602.1.exon2;Parent=Dca30602.1 |
