Dca30606.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold306)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30606.1 |
489 |
567 |
675 |
5.77 |
79 |
48 |
4e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1329 |
1410 |
1553 |
5.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30606.1 |
8 |
487 |
675 |
29.48 |
480 |
42 |
1e-99
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
605 |
1053 |
1539 |
29.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold306 |
Augustus |
mRNA |
214257 |
223813 |
. |
- |
. |
ID=Dca30606.1;Parent=Dca30606 |
| scaffold306 |
Augustus |
exon |
214257 |
214448 |
. |
- |
. |
ID=Dca30606.1.exon1;Parent=Dca30606.1 |
| scaffold306 |
Augustus |
exon |
216189 |
216352 |
. |
- |
. |
ID=Dca30606.1.exon2;Parent=Dca30606.1 |
| scaffold306 |
Augustus |
exon |
221442 |
221644 |
. |
- |
. |
ID=Dca30606.1.exon3;Parent=Dca30606.1 |
| scaffold306 |
Augustus |
exon |
222345 |
223813 |
. |
- |
. |
ID=Dca30606.1.exon4;Parent=Dca30606.1 |
