Carnation DB

Dca30609.1

Annotation

12-exons
f-1
sp|F6I5T1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g00220#unknown#0F0P0C
sp|B9RGB3_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1452660#GO:0004402#1F0P0C
Repeat List (scaffold3061)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30609.1	79	425	425	65.41	347	75	2e-156
Target_name	Start	End	Length	Cov(%)
sp\|F6I5T1_VITVI	96	422	773	42.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30609.1	80	425	425	59.76	346	65	2e-141
Target_name	Start	End	Length	Cov(%)
AT5G13480.2	22	370	653	53.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3061	Augustus	mRNA	1675	8543	.	+	.	ID=Dca30609.1;Parent=Dca30609
scaffold3061	Augustus	exon	1675	1921	.	+	.	ID=Dca30609.1.exon1;Parent=Dca30609.1
scaffold3061	Augustus	exon	2592	2683	.	+	.	ID=Dca30609.1.exon2;Parent=Dca30609.1
scaffold3061	Augustus	exon	4929	5033	.	+	.	ID=Dca30609.1.exon3;Parent=Dca30609.1
scaffold3061	Augustus	exon	6624	6719	.	+	.	ID=Dca30609.1.exon4;Parent=Dca30609.1
scaffold3061	Augustus	exon	6796	6878	.	+	.	ID=Dca30609.1.exon5;Parent=Dca30609.1
scaffold3061	Augustus	exon	6989	7060	.	+	.	ID=Dca30609.1.exon6;Parent=Dca30609.1
scaffold3061	Augustus	exon	7153	7241	.	+	.	ID=Dca30609.1.exon7;Parent=Dca30609.1
scaffold3061	Augustus	exon	7409	7468	.	+	.	ID=Dca30609.1.exon8;Parent=Dca30609.1
scaffold3061	Augustus	exon	7546	7606	.	+	.	ID=Dca30609.1.exon9;Parent=Dca30609.1
scaffold3061	Augustus	exon	7685	7772	.	+	.	ID=Dca30609.1.exon10;Parent=Dca30609.1
scaffold3061	Augustus	exon	8097	8160	.	+	.	ID=Dca30609.1.exon11;Parent=Dca30609.1
scaffold3061	Augustus	exon	8323	8543	.	+	.	ID=Dca30609.1.exon12;Parent=Dca30609.1