Carnation DB

Dca30615.1

Annotation

13-exons
f-1
sp|F6HEY1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g01050#GO:0005509#1F0P0C
AT1G30900.1 | Symbols: VSR6, VSR3;3, BP80-3;3 | VACUOLAR SORTING RECEPTOR 6 | chr1:10997275-11000543 FORWARD LENGTH=631
Repeat List (scaffold3062)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30615.1	13	600	600	71.16	588	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HEY1_VITVI	8	630	630	98.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30615.1	11	585	600	69.83	575	70	0
Target_name	Start	End	Length	Cov(%)
AT1G30900.1	8	612	631	95.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3062	Augustus	mRNA	7921	12871	.	+	.	ID=Dca30615.1;Parent=Dca30615
scaffold3062	Augustus	exon	7921	8230	.	+	.	ID=Dca30615.1.exon1;Parent=Dca30615.1
scaffold3062	Augustus	exon	10176	10868	.	+	.	ID=Dca30615.1.exon2;Parent=Dca30615.1
scaffold3062	Augustus	exon	10951	11039	.	+	.	ID=Dca30615.1.exon3;Parent=Dca30615.1
scaffold3062	Augustus	exon	11122	11191	.	+	.	ID=Dca30615.1.exon4;Parent=Dca30615.1
scaffold3062	Augustus	exon	11289	11372	.	+	.	ID=Dca30615.1.exon5;Parent=Dca30615.1
scaffold3062	Augustus	exon	11512	11573	.	+	.	ID=Dca30615.1.exon6;Parent=Dca30615.1
scaffold3062	Augustus	exon	11695	11776	.	+	.	ID=Dca30615.1.exon7;Parent=Dca30615.1
scaffold3062	Augus-PASA	exon	11992	12074	.	+	.	ID=Dca30615.1.exon8;Parent=Dca30615.1
scaffold3062	Augus-PASA	exon	12167	12230	.	+	.	ID=Dca30615.1.exon9;Parent=Dca30615.1
scaffold3062	Augus-PASA	exon	12325	12453	.	+	.	ID=Dca30615.1.exon10;Parent=Dca30615.1
scaffold3062	Augustus	exon	12557	12572	.	+	.	ID=Dca30615.1.exon11;Parent=Dca30615.1
scaffold3062	Augustus	exon	12654	12660	.	+	.	ID=Dca30615.1.exon12;Parent=Dca30615.1
scaffold3062	Augus-PASA	exon	12758	12871	.	+	.	ID=Dca30615.1.exon13;Parent=Dca30615.1