Dca3071.1
Annotation
- 3-exons
- f-1
- sp|Q9FIC5_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1108)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3071.1 |
133 |
283 |
283 |
32.15 |
151 |
61 |
6e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FIC5_ARATH |
934 |
1084 |
1462 |
10.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3071.1 |
150 |
283 |
283 |
26.14 |
134 |
54 |
2e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
98 |
236 |
1262 |
11.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1108 |
Augustus |
mRNA |
42572 |
47549 |
. |
- |
. |
ID=Dca3071.1;Parent=Dca3071 |
| scaffold1108 |
Augustus |
exon |
42572 |
43020 |
. |
- |
. |
ID=Dca3071.1.exon1;Parent=Dca3071.1 |
| scaffold1108 |
Augustus |
exon |
43105 |
43168 |
. |
- |
. |
ID=Dca3071.1.exon2;Parent=Dca3071.1 |
| scaffold1108 |
Augustus |
exon |
47211 |
47549 |
. |
- |
. |
ID=Dca3071.1.exon3;Parent=Dca3071.1 |
