Dca30723.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|O22175_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23330#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3079)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30723.1 |
355 |
986 |
1011 |
28.38 |
632 |
45 |
5e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
32 |
609 |
1717 |
33.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30723.1 |
29 |
293 |
1011 |
11.67 |
265 |
45 |
7e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
72 |
324 |
1262 |
20.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3079 |
Augustus |
mRNA |
21378 |
28178 |
. |
+ |
. |
ID=Dca30723.1;Parent=Dca30723 |
| scaffold3079 |
Augustus |
exon |
21378 |
22272 |
. |
+ |
. |
ID=Dca30723.1.exon1;Parent=Dca30723.1 |
| scaffold3079 |
Augustus |
exon |
22487 |
22551 |
. |
+ |
. |
ID=Dca30723.1.exon2;Parent=Dca30723.1 |
| scaffold3079 |
Augustus |
exon |
22632 |
24626 |
. |
+ |
. |
ID=Dca30723.1.exon3;Parent=Dca30723.1 |
| scaffold3079 |
Augustus |
exon |
28098 |
28178 |
. |
+ |
. |
ID=Dca30723.1.exon4;Parent=Dca30723.1 |
