Dca3078.1
Annotation
- 2-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1108)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3078.1 |
184 |
347 |
348 |
25.57 |
164 |
54 |
7e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
467 |
631 |
1553 |
10.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3078.1 |
188 |
347 |
348 |
14.65 |
160 |
31 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
125 |
288 |
707 |
23.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1108 |
Augustus |
mRNA |
76578 |
77836 |
. |
- |
. |
ID=Dca3078.1;Parent=Dca3078 |
| scaffold1108 |
Augustus |
exon |
76578 |
77071 |
. |
- |
. |
ID=Dca3078.1.exon1;Parent=Dca3078.1 |
| scaffold1108 |
Augustus |
exon |
77284 |
77836 |
. |
- |
. |
ID=Dca3078.1.exon2;Parent=Dca3078.1 |
