Dca30834.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold30968)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30834.1 |
21 |
252 |
283 |
31.8 |
232 |
31 |
7e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
289 |
1501 |
18.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30834.1 |
42 |
146 |
283 |
11.66 |
105 |
32 |
7e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
184 |
296 |
35.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold30968 |
Augustus |
mRNA |
1 |
1015 |
. |
- |
. |
ID=Dca30834.1;Parent=Dca30834 |
| scaffold30968 |
Augustus |
exon |
1 |
421 |
. |
- |
. |
ID=Dca30834.1.exon1;Parent=Dca30834.1 |
| scaffold30968 |
Augustus |
exon |
519 |
906 |
. |
- |
. |
ID=Dca30834.1.exon2;Parent=Dca30834.1 |
| scaffold30968 |
Augustus |
exon |
976 |
1015 |
. |
- |
. |
ID=Dca30834.1.exon3;Parent=Dca30834.1 |
