Dca30884.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold31)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30884.1 |
58 |
174 |
178 |
43.25 |
117 |
66 |
2e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
482 |
598 |
764 |
15.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca30884.1 |
55 |
178 |
178 |
20.78 |
124 |
30 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
1 |
124 |
591 |
20.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold31 |
Augustus |
mRNA |
186868 |
189202 |
. |
- |
. |
ID=Dca30884.1;Parent=Dca30884 |
| scaffold31 |
Augustus |
exon |
186868 |
187234 |
. |
- |
. |
ID=Dca30884.1.exon1;Parent=Dca30884.1 |
| scaffold31 |
Augustus |
exon |
189033 |
189202 |
. |
- |
. |
ID=Dca30884.1.exon2;Parent=Dca30884.1 |
