Carnation DB

Dca30889.1

Annotation

13-exons
f-1
sp|F6HF03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g00070#unknown#0F0P0C
AT1G69070.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink). | chr1:25967421-25971389 REVERSE LENGTH=901
Repeat List (scaffold31)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30889.1	25	896	896	57.03	872	55	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HF03_VITVI	1	928	928	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30889.1	20	888	896	51.33	869	51	0
Target_name	Start	End	Length	Cov(%)
AT1G69070.1	21	891	901	96.67

seqname	source	feature	start	end	score	strand	frame	group
scaffold31	Augustus	mRNA	244573	253066	.	-	.	ID=Dca30889.1;Parent=Dca30889
scaffold31	Augustus	exon	244573	244837	.	-	.	ID=Dca30889.1.exon1;Parent=Dca30889.1
scaffold31	Augustus	exon	244941	245219	.	-	.	ID=Dca30889.1.exon2;Parent=Dca30889.1
scaffold31	Augustus	exon	246008	246150	.	-	.	ID=Dca30889.1.exon3;Parent=Dca30889.1
scaffold31	Augustus	exon	246961	247154	.	-	.	ID=Dca30889.1.exon4;Parent=Dca30889.1
scaffold31	Augustus	exon	247265	247457	.	-	.	ID=Dca30889.1.exon5;Parent=Dca30889.1
scaffold31	Augustus	exon	247580	248230	.	-	.	ID=Dca30889.1.exon6;Parent=Dca30889.1
scaffold31	Augustus	exon	248677	248805	.	-	.	ID=Dca30889.1.exon7;Parent=Dca30889.1
scaffold31	Augustus	exon	249439	249636	.	-	.	ID=Dca30889.1.exon8;Parent=Dca30889.1
scaffold31	Augustus	exon	250563	250622	.	-	.	ID=Dca30889.1.exon9;Parent=Dca30889.1
scaffold31	Augustus	exon	250901	250983	.	-	.	ID=Dca30889.1.exon10;Parent=Dca30889.1
scaffold31	Augustus	exon	251782	251923	.	-	.	ID=Dca30889.1.exon11;Parent=Dca30889.1
scaffold31	Augustus	exon	252389	252523	.	-	.	ID=Dca30889.1.exon12;Parent=Dca30889.1
scaffold31	Augustus	exon	252848	253066	.	-	.	ID=Dca30889.1.exon13;Parent=Dca30889.1