Carnation DB

Dca3089.1

Annotation

7-exons
f-1
sp|C6TBE6_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
AT5G04830.1 | Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr5:1402294-1403671 REVERSE LENGTH=178
Repeat List (scaffold1109)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3089.1	56	212	215	52.09	157	70	7e-62
Target_name	Start	End	Length	Cov(%)
sp\|C6TBE6_SOYBN	49	208	211	75.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3089.1	59	212	215	49.3	154	68	4e-58
Target_name	Start	End	Length	Cov(%)
AT5G04830.1	18	174	178	88.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1109	Augus-PASA	mRNA	4548	6787	.	+	.	ID=Dca3089.1;Parent=Dca3089
scaffold1109	Augus-PASA	exon	4548	4650	.	+	.	ID=Dca3089.1.exon1;Parent=Dca3089.1
scaffold1109	Augus-PASA	exon	5261	5375	.	+	.	ID=Dca3089.1.exon2;Parent=Dca3089.1
scaffold1109	Augus-PASA	exon	5538	5618	.	+	.	ID=Dca3089.1.exon3;Parent=Dca3089.1
scaffold1109	Augus-PASA	exon	5767	5806	.	+	.	ID=Dca3089.1.exon4;Parent=Dca3089.1
scaffold1109	Augus-PASA	exon	6083	6151	.	+	.	ID=Dca3089.1.exon5;Parent=Dca3089.1
scaffold1109	Augus-PASA	exon	6321	6430	.	+	.	ID=Dca3089.1.exon6;Parent=Dca3089.1
scaffold1109	Augus-PASA	exon	6658	6787	.	+	.	ID=Dca3089.1.exon7;Parent=Dca3089.1