Carnation DB

Dca30892.1

Annotation

7-exons
f-1558
sp|A5B7R0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010420#GO:0003676;GO:0015074#1F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold31)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30892.1	1	628	651	45.31	628	42	5e-144
Target_name	Start	End	Length	Cov(%)
sp\|A5B7R0_VITVI	585	1284	1288	54.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30892.1	1	611	651	34.25	611	31	1e-80
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	655	1378	1401	51.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold31	Augustus	mRNA	287999	296718	.	-	.	ID=Dca30892.1;Parent=Dca30892
scaffold31	Augustus	exon	287999	288513	.	-	.	ID=Dca30892.1.exon1;Parent=Dca30892.1
scaffold31	Augustus	exon	288710	289865	.	-	.	ID=Dca30892.1.exon2;Parent=Dca30892.1
scaffold31	Augustus	exon	289935	290002	.	-	.	ID=Dca30892.1.exon3;Parent=Dca30892.1
scaffold31	Augustus	exon	290198	290901	.	-	.	ID=Dca30892.1.exon4;Parent=Dca30892.1
scaffold31	Augustus	exon	291000	291078	.	-	.	ID=Dca30892.1.exon5;Parent=Dca30892.1
scaffold31	Augustus	exon	295035	295715	.	-	.	ID=Dca30892.1.exon6;Parent=Dca30892.1
scaffold31	Augustus	exon	296409	296718	.	-	.	ID=Dca30892.1.exon7;Parent=Dca30892.1