Carnation DB

Dca30938.1

Annotation

5-exons
f-1
sp|A5C5E0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_003766#GO:0035091;GO:0007154#1F1P0C
AT3G48195.1 | Symbols: | Phox (PX) domain-containing protein | chr3:17828706-17832388 REVERSE LENGTH=938
Repeat List (scaffold3100)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30938.1	7	973	1028	48.63	967	45	0
Target_name	Start	End	Length	Cov(%)
sp\|A5C5E0_VITVI	13	1093	1333	81.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca30938.1	28	91	1028	3.69	64	59	1e-09
Target_name	Start	End	Length	Cov(%)
AT3G48195.1	13	68	938	5.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3100	Augustus	mRNA	19520	23373	.	+	.	ID=Dca30938.1;Parent=Dca30938
scaffold3100	Augustus	exon	19520	20947	.	+	.	ID=Dca30938.1.exon1;Parent=Dca30938.1
scaffold3100	Augustus	exon	21088	22068	.	+	.	ID=Dca30938.1.exon2;Parent=Dca30938.1
scaffold3100	Augustus	exon	22205	22430	.	+	.	ID=Dca30938.1.exon3;Parent=Dca30938.1
scaffold3100	Augus-PASA	exon	22765	22907	.	+	.	ID=Dca30938.1.exon4;Parent=Dca30938.1
scaffold3100	Augus-PASA	exon	23065	23373	.	+	.	ID=Dca30938.1.exon5;Parent=Dca30938.1