Carnation DB

Dca31077.1

Annotation

10-exons
f-1
sp|B9HQS1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_875730#GO:0004190;GO:0006508#1F1P0C
AT5G22850.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr5:7633717-7636298 REVERSE LENGTH=493
Repeat List (scaffold312)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31077.1	34	467	467	55.88	434	57	5e-144
Target_name	Start	End	Length	Cov(%)
sp\|B9HQS1_POPTR	1	459	468	98.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31077.1	28	454	467	51.39	427	53	5e-138
Target_name	Start	End	Length	Cov(%)
AT5G22850.1	25	478	493	92.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold312	Augus-PASA	mRNA	76116	81536	.	-	.	ID=Dca31077.1;Parent=Dca31077
scaffold312	Augus-PASA	exon	76116	76267	.	-	.	ID=Dca31077.1.exon1;Parent=Dca31077.1
scaffold312	Augus-PASA	exon	76517	76591	.	-	.	ID=Dca31077.1.exon2;Parent=Dca31077.1
scaffold312	Augus-PASA	exon	76734	76800	.	-	.	ID=Dca31077.1.exon3;Parent=Dca31077.1
scaffold312	Augustus	exon	77023	77119	.	-	.	ID=Dca31077.1.exon4;Parent=Dca31077.1
scaffold312	Augustus	exon	77396	77469	.	-	.	ID=Dca31077.1.exon5;Parent=Dca31077.1
scaffold312	Augustus	exon	77586	77748	.	-	.	ID=Dca31077.1.exon6;Parent=Dca31077.1
scaffold312	Augustus	exon	78299	78526	.	-	.	ID=Dca31077.1.exon7;Parent=Dca31077.1
scaffold312	Augustus	exon	78780	79027	.	-	.	ID=Dca31077.1.exon8;Parent=Dca31077.1
scaffold312	Augustus	exon	79201	79249	.	-	.	ID=Dca31077.1.exon9;Parent=Dca31077.1
scaffold312	Augustus	exon	81286	81536	.	-	.	ID=Dca31077.1.exon10;Parent=Dca31077.1