Carnation DB

Dca311.1

Annotation

10-exons
f-1
sp|D7T2M5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0094g01400#GO:0003676;GO:0000166#2F0P0C
sp|B9SSZ3_RICCO#Lupus la ribonucleoprotein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1269060#GO:0005634;GO:0030529;GO:0000166;GO:0003723;GO:0006396#2F1P2C
Repeat List (scaffold1001)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca311.1	173	507	510	41.17	335	61	2e-102
Target_name	Start	End	Length	Cov(%)
sp\|D7T2M5_VITVI	5	324	325	98.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca311.1	61	431	510	38.03	371	47	4e-82
Target_name	Start	End	Length	Cov(%)
AT2G43970.1	50	445	545	72.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1001	Augustus	mRNA	13435	19610	.	+	.	ID=Dca311.1;Parent=Dca311
scaffold1001	Augustus	exon	13435	13986	.	+	.	ID=Dca311.1.exon1;Parent=Dca311.1
scaffold1001	Augustus	exon	14882	14963	.	+	.	ID=Dca311.1.exon2;Parent=Dca311.1
scaffold1001	Augustus	exon	16015	16109	.	+	.	ID=Dca311.1.exon3;Parent=Dca311.1
scaffold1001	Augustus	exon	16288	16359	.	+	.	ID=Dca311.1.exon4;Parent=Dca311.1
scaffold1001	Augustus	exon	16494	16573	.	+	.	ID=Dca311.1.exon5;Parent=Dca311.1
scaffold1001	Augustus	exon	16857	16956	.	+	.	ID=Dca311.1.exon6;Parent=Dca311.1
scaffold1001	Augustus	exon	17532	17579	.	+	.	ID=Dca311.1.exon7;Parent=Dca311.1
scaffold1001	Augustus	exon	17688	17756	.	+	.	ID=Dca311.1.exon8;Parent=Dca311.1
scaffold1001	Augustus	exon	18301	18471	.	+	.	ID=Dca311.1.exon9;Parent=Dca311.1
scaffold1001	Augustus	exon	19347	19610	.	+	.	ID=Dca311.1.exon10;Parent=Dca311.1