Carnation DB

Dca3112.1

Annotation

10-exons
f-1
sp|D7SQJ9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0141g00260#GO:0003697;GO:0006260#1F1P0C
sp|B9S4S1_RICCO#Single-stranded DNA-binding protein, ssb, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0991710#GO:0003697;GO:0006260#1F1P0C
Repeat List (scaffold111)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3112.1	10	262	505	24.95	253	50	9e-53
Target_name	Start	End	Length	Cov(%)
sp\|D7SQJ9_VITVI	10	224	286	75.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3112.1	8	262	505	20.79	255	39	9e-39
Target_name	Start	End	Length	Cov(%)
Os03t0633900-01	3	242	312	76.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold111	Augustus	mRNA	119153	125841	.	-	.	ID=Dca3112.1;Parent=Dca3112
scaffold111	Augustus	exon	119153	119314	.	-	.	ID=Dca3112.1.exon1;Parent=Dca3112.1
scaffold111	Augustus	exon	119711	119817	.	-	.	ID=Dca3112.1.exon2;Parent=Dca3112.1
scaffold111	Augustus	exon	119915	120002	.	-	.	ID=Dca3112.1.exon3;Parent=Dca3112.1
scaffold111	Augustus	exon	120092	120230	.	-	.	ID=Dca3112.1.exon4;Parent=Dca3112.1
scaffold111	Augustus	exon	121193	121428	.	-	.	ID=Dca3112.1.exon5;Parent=Dca3112.1
scaffold111	Augustus	exon	123587	123693	.	-	.	ID=Dca3112.1.exon6;Parent=Dca3112.1
scaffold111	Augustus	exon	123788	123875	.	-	.	ID=Dca3112.1.exon7;Parent=Dca3112.1
scaffold111	Augustus	exon	123965	124103	.	-	.	ID=Dca3112.1.exon8;Parent=Dca3112.1
scaffold111	Augustus	exon	124568	124660	.	-	.	ID=Dca3112.1.exon9;Parent=Dca3112.1
scaffold111	Augustus	exon	125483	125841	.	-	.	ID=Dca3112.1.exon10;Parent=Dca3112.1