Carnation DB

Dca3129.1

Annotation

6-exons
f-1
sp|B9HUR4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1090203#unknown#0F0P0C
Repeat List (scaffold111)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3129.1	30	500	515	53.2	471	57	8e-116
Target_name	Start	End	Length	Cov(%)
sp\|B9HUR4_POPTR	19	478	485	94.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3129.1	30	500	515	51.26	471	55	7e-115
Target_name	Start	End	Length	Cov(%)
AT3G22810.1	18	465	472	94.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold111	Augustus	mRNA	282453	289271	.	-	.	ID=Dca3129.1;Parent=Dca3129
scaffold111	Augustus	exon	282453	282694	.	-	.	ID=Dca3129.1.exon1;Parent=Dca3129.1
scaffold111	Augustus	exon	282803	282907	.	-	.	ID=Dca3129.1.exon2;Parent=Dca3129.1
scaffold111	Augustus	exon	283017	283241	.	-	.	ID=Dca3129.1.exon3;Parent=Dca3129.1
scaffold111	Augustus	exon	283388	283844	.	-	.	ID=Dca3129.1.exon4;Parent=Dca3129.1
scaffold111	Augustus	exon	288086	288238	.	-	.	ID=Dca3129.1.exon5;Parent=Dca3129.1
scaffold111	Augustus	exon	288906	289271	.	-	.	ID=Dca3129.1.exon6;Parent=Dca3129.1