Carnation DB

Dca313.1

Annotation

7-exons
f-1
sp|B9N133_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_923624#unknown#0F0P0C
Repeat List (scaffold1001)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca313.1	63	253	295	52.54	191	82	1e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9N133_POPTR	1	191	212	90.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca313.1	61	253	295	53.22	193	82	6e-90
Target_name	Start	End	Length	Cov(%)
AT2G43945.1	76	268	289	66.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1001	Augustus	mRNA	27852	32494	.	+	.	ID=Dca313.1;Parent=Dca313
scaffold1001	Augustus	exon	27852	28019	.	+	.	ID=Dca313.1.exon1;Parent=Dca313.1
scaffold1001	Augustus	exon	30391	30585	.	+	.	ID=Dca313.1.exon2;Parent=Dca313.1
scaffold1001	Augustus	exon	30694	30810	.	+	.	ID=Dca313.1.exon3;Parent=Dca313.1
scaffold1001	Augustus	exon	30889	31038	.	+	.	ID=Dca313.1.exon4;Parent=Dca313.1
scaffold1001	Augustus	exon	31939	31997	.	+	.	ID=Dca313.1.exon5;Parent=Dca313.1
scaffold1001	Augustus	exon	32184	32249	.	+	.	ID=Dca313.1.exon6;Parent=Dca313.1
scaffold1001	Augustus	exon	32362	32494	.	+	.	ID=Dca313.1.exon7;Parent=Dca313.1