Carnation DB

Dca31326.1

Annotation

5-exons
f-1
sp|B9IL48_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_910433#GO:0016021;GO:0005524;GO:0004674#2F0P1C
AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010
Repeat List (scaffold315)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31326.1	33	785	791	49.3	753	42	7e-178
Target_name	Start	End	Length	Cov(%)
sp\|B9IL48_POPTR	29	955	1026	90.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31326.1	259	450	791	9.1	192	37	7e-20
Target_name	Start	End	Length	Cov(%)
AT3G47570.1	63	256	1010	19.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold315	Augustus	mRNA	9384	13018	.	-	.	ID=Dca31326.1;Parent=Dca31326
scaffold315	Augustus	exon	9384	9586	.	-	.	ID=Dca31326.1.exon1;Parent=Dca31326.1
scaffold315	Augustus	exon	10376	11338	.	-	.	ID=Dca31326.1.exon2;Parent=Dca31326.1
scaffold315	Augustus	exon	11415	11798	.	-	.	ID=Dca31326.1.exon3;Parent=Dca31326.1
scaffold315	Augustus	exon	12023	12652	.	-	.	ID=Dca31326.1.exon4;Parent=Dca31326.1
scaffold315	Augustus	exon	12823	13018	.	-	.	ID=Dca31326.1.exon5;Parent=Dca31326.1