Dca31348.1
Annotation
- 3-exons
- f-1
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold3150)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31348.1 |
14 |
1101 |
1101 |
58.85 |
1088 |
54 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FZN9_ARATH |
590 |
1791 |
1864 |
64.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31348.1 |
235 |
1028 |
1101 |
22.79 |
794 |
30 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
518 |
1287 |
1539 |
50.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3150 |
Augustus |
mRNA |
1425 |
5177 |
. |
- |
. |
ID=Dca31348.1;Parent=Dca31348 |
| scaffold3150 |
Augustus |
exon |
1425 |
2158 |
. |
- |
. |
ID=Dca31348.1.exon1;Parent=Dca31348.1 |
| scaffold3150 |
Augustus |
exon |
2232 |
4481 |
. |
- |
. |
ID=Dca31348.1.exon2;Parent=Dca31348.1 |
| scaffold3150 |
Augustus |
exon |
4859 |
5177 |
. |
- |
. |
ID=Dca31348.1.exon3;Parent=Dca31348.1 |
