Carnation DB

Dca31365.1

Annotation

6-exons
f-1
sp|A2I5F2_BETVU#Integrase#Beta vulgaris (Sugar beet)#unknown#unknown#0F0P0C
Repeat List (scaffold3154)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31365.1	36	193	244	36.88	158	55	1e-42
Target_name	Start	End	Length	Cov(%)
sp\|A2I5F2_BETVU	35	198	297	55.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31365.1	41	126	244	15.57	86	45	2e-16
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	139	223	1262	6.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3154	Augustus	mRNA	29490	34944	.	+	.	ID=Dca31365.1;Parent=Dca31365
scaffold3154	Augustus	exon	29490	29611	.	+	.	ID=Dca31365.1.exon1;Parent=Dca31365.1
scaffold3154	Augustus	exon	29709	29967	.	+	.	ID=Dca31365.1.exon2;Parent=Dca31365.1
scaffold3154	Augustus	exon	30289	30486	.	+	.	ID=Dca31365.1.exon3;Parent=Dca31365.1
scaffold3154	Augustus	exon	30707	30746	.	+	.	ID=Dca31365.1.exon4;Parent=Dca31365.1
scaffold3154	Augustus	exon	34046	34087	.	+	.	ID=Dca31365.1.exon5;Parent=Dca31365.1
scaffold3154	Augustus	exon	34871	34944	.	+	.	ID=Dca31365.1.exon6;Parent=Dca31365.1