Carnation DB

Dca3137.1

Annotation

6-exons
f-1
sp|B9S4A1_RICCO#Alpha-soluble nsf attachment protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0688690#GO:0005488;GO:0006886#1F1P0C
Repeat List (scaffold1110)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3137.1	18	209	210	51.42	192	56	1e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9S4A1_RICCO	29	220	289	66.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3137.1	18	209	210	43.8	192	48	5e-50
Target_name	Start	End	Length	Cov(%)
Os08t0282400-01	29	220	290	66.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1110	Augustus	mRNA	58805	60802	.	+	.	ID=Dca3137.1;Parent=Dca3137
scaffold1110	Augustus	exon	58805	58916	.	+	.	ID=Dca3137.1.exon1;Parent=Dca3137.1
scaffold1110	Augustus	exon	59519	59568	.	+	.	ID=Dca3137.1.exon2;Parent=Dca3137.1
scaffold1110	Augustus	exon	59770	59845	.	+	.	ID=Dca3137.1.exon3;Parent=Dca3137.1
scaffold1110	Augustus	exon	60190	60269	.	+	.	ID=Dca3137.1.exon4;Parent=Dca3137.1
scaffold1110	Augustus	exon	60378	60529	.	+	.	ID=Dca3137.1.exon5;Parent=Dca3137.1
scaffold1110	Augustus	exon	60640	60802	.	+	.	ID=Dca3137.1.exon6;Parent=Dca3137.1