Carnation DB

Dca31378.1

Annotation

5-exons
f-1
sp|E0CTG3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0028g03360#GO:0005524;GO:0004674#2F0P0C
Repeat List (scaffold3157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31378.1	1	73	167	21.55	73	50	1e-12
Target_name	Start	End	Length	Cov(%)
sp\|E0CTG3_VITVI	96	167	552	13.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31378.1	76	115	167	18.56	40	76	8e-11
Target_name	Start	End	Length	Cov(%)
AT3G16785.1	81	121	1096	3.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3157	Augustus	mRNA	4080	6474	.	+	.	ID=Dca31378.1;Parent=Dca31378
scaffold3157	Augustus	exon	4080	4237	.	+	.	ID=Dca31378.1.exon1;Parent=Dca31378.1
scaffold3157	Augustus	exon	4346	4412	.	+	.	ID=Dca31378.1.exon2;Parent=Dca31378.1
scaffold3157	Augustus	exon	4953	5054	.	+	.	ID=Dca31378.1.exon3;Parent=Dca31378.1
scaffold3157	Augustus	exon	5500	5601	.	+	.	ID=Dca31378.1.exon4;Parent=Dca31378.1
scaffold3157	Augustus	exon	6400	6474	.	+	.	ID=Dca31378.1.exon5;Parent=Dca31378.1