Carnation DB

Dca31380.1

Annotation

8-exons
f-1
sp|D7T9X5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g00400#GO:0005622;GO:0003676;GO:0000166;GO:0006810#2F1P1C
sp|B9RLM4_RICCO#RNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1469490#GO:0005622;GO:0003676;GO:0000166;GO:0006810#2F1P1C
Repeat List (scaffold3157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31380.1	1	462	471	47.34	462	45	2e-85
Target_name	Start	End	Length	Cov(%)
sp\|D7T9X5_VITVI	1	483	484	99.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31380.1	1	433	471	39.91	433	40	7e-70
Target_name	Start	End	Length	Cov(%)
AT5G60980.2	1	434	460	94.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3157	Augus-PASA	mRNA	22451	25069	.	-	.	ID=Dca31380.1;Parent=Dca31380
scaffold3157	Augus-PASA	exon	22451	22653	.	-	.	ID=Dca31380.1.exon1;Parent=Dca31380.1
scaffold3157	Augus-PASA	exon	22891	22954	.	-	.	ID=Dca31380.1.exon2;Parent=Dca31380.1
scaffold3157	Augus-PASA	exon	23371	23430	.	-	.	ID=Dca31380.1.exon3;Parent=Dca31380.1
scaffold3157	Augus-PASA	exon	23525	23646	.	-	.	ID=Dca31380.1.exon4;Parent=Dca31380.1
scaffold3157	Augustus	exon	23748	23970	.	-	.	ID=Dca31380.1.exon5;Parent=Dca31380.1
scaffold3157	Augustus	exon	24063	24274	.	-	.	ID=Dca31380.1.exon6;Parent=Dca31380.1
scaffold3157	Augustus	exon	24372	24717	.	-	.	ID=Dca31380.1.exon7;Parent=Dca31380.1
scaffold3157	Augustus	exon	24884	25069	.	-	.	ID=Dca31380.1.exon8;Parent=Dca31380.1