Dca3142.1
Annotation
- 3-exons
- f-1
- sp|F6H2Q5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0125g00180#GO:0008270#1F0P0C
- Os04t0508800-01 Similar to Retroelement pol polyprotein-like.
- Repeat List (scaffold11104)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3142.1 |
6 |
568 |
656 |
45.27 |
563 |
49 |
1e-149
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H2Q5_VITVI |
38 |
634 |
696 |
85.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3142.1 |
8 |
584 |
656 |
39.78 |
577 |
43 |
1e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0508800-01 |
93 |
683 |
709 |
83.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11104 |
Augustus |
mRNA |
50 |
3241 |
. |
+ |
. |
ID=Dca3142.1;Parent=Dca3142 |
| scaffold11104 |
Augustus |
exon |
50 |
64 |
. |
+ |
. |
ID=Dca3142.1.exon1;Parent=Dca3142.1 |
| scaffold11104 |
Augustus |
exon |
1183 |
3081 |
. |
+ |
. |
ID=Dca3142.1.exon2;Parent=Dca3142.1 |
| scaffold11104 |
Augustus |
exon |
3185 |
3241 |
. |
+ |
. |
ID=Dca3142.1.exon3;Parent=Dca3142.1 |
