Carnation DB

Dca31423.1

Annotation

5-exons
f-1
sp|C7J2X9_ORYSJ#Os05g0235100 protein#Oryza sativa subsp japonica (Rice)#Name=Os05g0235100#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold3162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31423.1	198	400	400	37.5	203	74	9e-84
Target_name	Start	End	Length	Cov(%)
sp\|C7J2X9_ORYSJ	639	841	841	24.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31423.1	4	198	400	28.75	195	59	3e-66
Target_name	Start	End	Length	Cov(%)
AT2G40840.1	19	213	955	20.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3162	Augustus	mRNA	16744	18606	.	-	.	ID=Dca31423.1;Parent=Dca31423
scaffold3162	Augustus	exon	16744	17355	.	-	.	ID=Dca31423.1.exon1;Parent=Dca31423.1
scaffold3162	Augustus	exon	17744	17842	.	-	.	ID=Dca31423.1.exon2;Parent=Dca31423.1
scaffold3162	Augustus	exon	17925	17980	.	-	.	ID=Dca31423.1.exon3;Parent=Dca31423.1
scaffold3162	Augustus	exon	18048	18165	.	-	.	ID=Dca31423.1.exon4;Parent=Dca31423.1
scaffold3162	Augustus	exon	18289	18606	.	-	.	ID=Dca31423.1.exon5;Parent=Dca31423.1