Dca31424.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3162)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31424.1 |
10 |
694 |
711 |
38.11 |
685 |
39 |
3e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
3 |
692 |
1296 |
53.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31424.1 |
366 |
623 |
711 |
13.36 |
258 |
37 |
1e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
268 |
525 |
573 |
45.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3162 |
Augustus |
mRNA |
18648 |
21243 |
. |
- |
. |
ID=Dca31424.1;Parent=Dca31424 |
| scaffold3162 |
Augustus |
exon |
18648 |
18678 |
. |
- |
. |
ID=Dca31424.1.exon1;Parent=Dca31424.1 |
| scaffold3162 |
Augustus |
exon |
19139 |
21243 |
. |
- |
. |
ID=Dca31424.1.exon2;Parent=Dca31424.1 |
