Carnation DB

Dca3149.1

Annotation

10-exons
f-1
sp|F6H383_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00650#GO:0005622;GO:0008408;GO:0003723#2F0P1C
AT2G25910.2 | Symbols: | 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | chr2:11049379-11051997 REVERSE LENGTH=342
Repeat List (scaffold1111)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3149.1	1	337	337	81.6	337	81	2e-159
Target_name	Start	End	Length	Cov(%)
sp\|F6H383_VITVI	29	368	369	92.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3149.1	1	336	337	75.07	336	75	6e-147
Target_name	Start	End	Length	Cov(%)
AT2G25910.2	1	341	342	99.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1111	Augus-PASA	mRNA	8487	13603	.	-	.	ID=Dca3149.1;Parent=Dca3149
scaffold1111	Augus-PASA	exon	8487	8561	.	-	.	ID=Dca3149.1.exon1;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	8708	8750	.	-	.	ID=Dca3149.1.exon2;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	8852	8981	.	-	.	ID=Dca3149.1.exon3;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	9279	9495	.	-	.	ID=Dca3149.1.exon4;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	9744	9790	.	-	.	ID=Dca3149.1.exon5;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	10516	10612	.	-	.	ID=Dca3149.1.exon6;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	10871	10921	.	-	.	ID=Dca3149.1.exon7;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	11021	11152	.	-	.	ID=Dca3149.1.exon8;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	11333	11499	.	-	.	ID=Dca3149.1.exon9;Parent=Dca3149.1
scaffold1111	Augus-PASA	exon	13549	13603	.	-	.	ID=Dca3149.1.exon10;Parent=Dca3149.1