Carnation DB

Dca31508.1

Annotation

15-exons
f-1
sp|B9H6X4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_209259#GO:0005488#1F0P0C
sp|B9RJU3_RICCO#WD and tetratricopeptide repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1038950#GO:0005488#1F0P0C
Repeat List (scaffold3176)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31508.1	1	625	625	68.96	625	57	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H6X4_POPTR	1	756	756	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31508.1	1	177	625	20.8	177	56	3e-67
Target_name	Start	End	Length	Cov(%)
AT5G10940.1	1	236	757	31.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3176	Augustus	mRNA	6236	16231	.	+	.	ID=Dca31508.1;Parent=Dca31508
scaffold3176	Augustus	exon	6236	6307	.	+	.	ID=Dca31508.1.exon1;Parent=Dca31508.1
scaffold3176	Augustus	exon	7742	7819	.	+	.	ID=Dca31508.1.exon2;Parent=Dca31508.1
scaffold3176	Augustus	exon	8917	9051	.	+	.	ID=Dca31508.1.exon3;Parent=Dca31508.1
scaffold3176	Augustus	exon	9387	9515	.	+	.	ID=Dca31508.1.exon4;Parent=Dca31508.1
scaffold3176	Augustus	exon	9850	9965	.	+	.	ID=Dca31508.1.exon5;Parent=Dca31508.1
scaffold3176	Augustus	exon	11181	11319	.	+	.	ID=Dca31508.1.exon6;Parent=Dca31508.1
scaffold3176	Augustus	exon	11411	11578	.	+	.	ID=Dca31508.1.exon7;Parent=Dca31508.1
scaffold3176	Augustus	exon	11667	11777	.	+	.	ID=Dca31508.1.exon8;Parent=Dca31508.1
scaffold3176	Augustus	exon	12905	13016	.	+	.	ID=Dca31508.1.exon9;Parent=Dca31508.1
scaffold3176	Augustus	exon	14527	14876	.	+	.	ID=Dca31508.1.exon10;Parent=Dca31508.1
scaffold3176	Augustus	exon	15036	15126	.	+	.	ID=Dca31508.1.exon11;Parent=Dca31508.1
scaffold3176	Augustus	exon	15460	15555	.	+	.	ID=Dca31508.1.exon12;Parent=Dca31508.1
scaffold3176	Augustus	exon	15689	15759	.	+	.	ID=Dca31508.1.exon13;Parent=Dca31508.1
scaffold3176	Augustus	exon	15885	16012	.	+	.	ID=Dca31508.1.exon14;Parent=Dca31508.1
scaffold3176	Augustus	exon	16150	16231	.	+	.	ID=Dca31508.1.exon15;Parent=Dca31508.1