Carnation DB

Dca31522.1

Annotation

5-exons
f-1
sp|A5B6Y5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_008801#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold3178)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31522.1	379	521	822	8.02	143	47	3e-27
Target_name	Start	End	Length	Cov(%)
sp\|A5B6Y5_VITVI	637	776	2318	6.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31522.1	662	822	822	5.96	161	31	1e-15
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	217	373	707	22.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3178	Augustus	mRNA	59989	67806	.	-	.	ID=Dca31522.1;Parent=Dca31522
scaffold3178	Augustus	exon	59989	60893	.	-	.	ID=Dca31522.1.exon1;Parent=Dca31522.1
scaffold3178	Augustus	exon	62076	62573	.	-	.	ID=Dca31522.1.exon2;Parent=Dca31522.1
scaffold3178	Augustus	exon	62729	63154	.	-	.	ID=Dca31522.1.exon3;Parent=Dca31522.1
scaffold3178	Augustus	exon	63353	63896	.	-	.	ID=Dca31522.1.exon4;Parent=Dca31522.1
scaffold3178	Augustus	exon	67711	67806	.	-	.	ID=Dca31522.1.exon5;Parent=Dca31522.1