Carnation DB

Dca3155.1

Annotation

5-exons
f-1
sp|D7MA38_ARALL#Serine hydroxymethyltransferase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491471#GO:0004372;GO:0030170;GO:0006544;GO:0006563;GO:0006730#2F3P0C
Repeat List (scaffold1111)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3155.1	2	39	226	11.5	38	69	1e-06
Target_name	Start	End	Length	Cov(%)
sp\|D7MA38_ARALL	75	112	530	7.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3155.1	2	39	226	11.5	38	69	1e-07
Target_name	Start	End	Length	Cov(%)
AT4G32520.1	75	112	529	7.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1111	Augustus	mRNA	55496	57761	.	+	.	ID=Dca3155.1;Parent=Dca3155
scaffold1111	Augustus	exon	55496	55648	.	+	.	ID=Dca3155.1.exon1;Parent=Dca3155.1
scaffold1111	Augustus	exon	56202	56333	.	+	.	ID=Dca3155.1.exon2;Parent=Dca3155.1
scaffold1111	Augustus	exon	56960	57075	.	+	.	ID=Dca3155.1.exon3;Parent=Dca3155.1
scaffold1111	Augustus	exon	57369	57445	.	+	.	ID=Dca3155.1.exon4;Parent=Dca3155.1
scaffold1111	Augustus	exon	57559	57761	.	+	.	ID=Dca3155.1.exon5;Parent=Dca3155.1