Dca31572.1
Annotation
- 3-exons
- f-1
- sp|B9H7E4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559231#GO:0003676#1F0P0C
- AT3G22220.1 | Symbols: | hAT transposon superfamily | chr3:7839808-7842358 REVERSE LENGTH=761
- Repeat List (scaffold3184)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31572.1 |
33 |
324 |
328 |
33.23 |
292 |
34 |
4e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H7E4_POPTR |
93 |
413 |
447 |
71.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31572.1 |
42 |
327 |
328 |
29.87 |
286 |
31 |
1e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G22220.1 |
184 |
497 |
761 |
41.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3184 |
Augustus |
mRNA |
6369 |
7533 |
. |
- |
. |
ID=Dca31572.1;Parent=Dca31572 |
| scaffold3184 |
Augustus |
exon |
6369 |
6976 |
. |
- |
. |
ID=Dca31572.1.exon1;Parent=Dca31572.1 |
| scaffold3184 |
Augustus |
exon |
7081 |
7174 |
. |
- |
. |
ID=Dca31572.1.exon2;Parent=Dca31572.1 |
| scaffold3184 |
Augustus |
exon |
7249 |
7533 |
. |
- |
. |
ID=Dca31572.1.exon3;Parent=Dca31572.1 |
