Carnation DB

Dca3158.1

Annotation

13-exons
f-1
sp|D7STN3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00910#GO:0016787#1F0P0C
sp|G7IB89_MEDTR#Histone deacetylase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_1g016440#unknown#0F0P0C
Repeat List (scaffold1111)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3158.1	13	343	348	72.98	331	77	3e-154
Target_name	Start	End	Length	Cov(%)
sp\|D7STN3_VITVI	21	351	359	92.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3158.1	4	342	348	70.11	339	72	7e-149
Target_name	Start	End	Length	Cov(%)
AT5G26040.2	44	382	387	87.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1111	Augus-PASA	mRNA	78441	85205	.	-	.	ID=Dca3158.1;Parent=Dca3158
scaffold1111	Augus-PASA	exon	78441	78532	.	-	.	ID=Dca3158.1.exon1;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	79048	79135	.	-	.	ID=Dca3158.1.exon2;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	79214	79300	.	-	.	ID=Dca3158.1.exon3;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	79971	80021	.	-	.	ID=Dca3158.1.exon4;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	80116	80160	.	-	.	ID=Dca3158.1.exon5;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	81259	81305	.	-	.	ID=Dca3158.1.exon6;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	81394	81458	.	-	.	ID=Dca3158.1.exon7;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	81555	81721	.	-	.	ID=Dca3158.1.exon8;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	82080	82148	.	-	.	ID=Dca3158.1.exon9;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	83171	83233	.	-	.	ID=Dca3158.1.exon10;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	83424	83541	.	-	.	ID=Dca3158.1.exon11;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	84932	84987	.	-	.	ID=Dca3158.1.exon12;Parent=Dca3158.1
scaffold1111	Augus-PASA	exon	85107	85205	.	-	.	ID=Dca3158.1.exon13;Parent=Dca3158.1