Dca3159.1
Annotation
- 2-exons
- f-3
- sp|A5C6U7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004899#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold11112)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3159.1 |
439 |
539 |
542 |
6.82 |
101 |
37 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C6U7_VITVI |
1469 |
1568 |
2452 |
4.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3159.1 |
329 |
456 |
542 |
7.74 |
128 |
32 |
5e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
234 |
360 |
707 |
17.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11112 |
Augustus |
mRNA |
1 |
4348 |
. |
+ |
. |
ID=Dca3159.1;Parent=Dca3159 |
| scaffold11112 |
Augustus |
exon |
1 |
1367 |
. |
+ |
. |
ID=Dca3159.1.exon1;Parent=Dca3159.1 |
| scaffold11112 |
Augustus |
exon |
4085 |
4348 |
. |
+ |
. |
ID=Dca3159.1.exon2;Parent=Dca3159.1 |
