Carnation DB

Dca31626.1

Annotation

6-exons
f-1
sp|B9GUT0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_756063#GO:0003676;GO:0000166#2F0P0C
Os08t0427900-01 Similar to Hin19 (Fragment).
Repeat List (scaffold3191)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31626.1	3	277	280	55.35	275	55	4e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9GUT0_POPTR	4	272	274	98.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca31626.1	58	280	280	42.5	223	49	4e-53
Target_name	Start	End	Length	Cov(%)
Os08t0427900-01	49	286	287	82.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3191	Augustus	mRNA	17004	22791	.	+	.	ID=Dca31626.1;Parent=Dca31626
scaffold3191	Augustus	exon	17004	17216	.	+	.	ID=Dca31626.1.exon1;Parent=Dca31626.1
scaffold3191	Augus-PASA	exon	18144	18287	.	+	.	ID=Dca31626.1.exon2;Parent=Dca31626.1
scaffold3191	Augus-PASA	exon	18373	18441	.	+	.	ID=Dca31626.1.exon3;Parent=Dca31626.1
scaffold3191	Augus-PASA	exon	20006	20214	.	+	.	ID=Dca31626.1.exon4;Parent=Dca31626.1
scaffold3191	Augus-PASA	exon	21948	21998	.	+	.	ID=Dca31626.1.exon5;Parent=Dca31626.1
scaffold3191	Augus-PASA	exon	22635	22791	.	+	.	ID=Dca31626.1.exon6;Parent=Dca31626.1