Dca31692.1
Annotation
- 2-exons
- f-1
- sp|B9RCL2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1689760#unknown#0F0P0C
- AT5G41620.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: intracellular protein transport protein USO1-related (TAIR:AT1G64180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:16646330-16648776 FORWARD LENGTH=623
- Repeat List (scaffold32)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31692.1 |
93 |
553 |
553 |
40.86 |
461 |
45 |
5e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RCL2_RICCO |
190 |
696 |
696 |
72.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31692.1 |
93 |
551 |
553 |
33.45 |
459 |
39 |
7e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G41620.1 |
165 |
623 |
623 |
73.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold32 |
Augustus |
mRNA |
100141 |
102224 |
. |
- |
. |
ID=Dca31692.1;Parent=Dca31692 |
| scaffold32 |
Augustus |
exon |
100141 |
101523 |
. |
- |
. |
ID=Dca31692.1.exon1;Parent=Dca31692.1 |
| scaffold32 |
Augustus |
exon |
101946 |
102224 |
. |
- |
. |
ID=Dca31692.1.exon2;Parent=Dca31692.1 |
