Dca31775.1
Annotation
- 3-exons
- f-1
- sp|Q2QRF8_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g27710#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3205)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31775.1 |
26 |
1512 |
1513 |
35.69 |
1487 |
34 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QRF8_ORYSJ |
411 |
1955 |
1956 |
78.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3205 |
Augustus |
mRNA |
509 |
5559 |
. |
+ |
. |
ID=Dca31775.1;Parent=Dca31775 |
| scaffold3205 |
Augustus |
exon |
509 |
2192 |
. |
+ |
. |
ID=Dca31775.1.exon1;Parent=Dca31775.1 |
| scaffold3205 |
Augustus |
exon |
2265 |
4051 |
. |
+ |
. |
ID=Dca31775.1.exon2;Parent=Dca31775.1 |
| scaffold3205 |
Augustus |
exon |
4489 |
5559 |
. |
+ |
. |
ID=Dca31775.1.exon3;Parent=Dca31775.1 |
