Dca31788.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3207)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31788.1 |
1 |
108 |
634 |
6.15 |
108 |
36 |
6e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
66 |
174 |
1553 |
7.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca31788.1 |
124 |
622 |
634 |
24.29 |
499 |
31 |
2e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
866 |
1345 |
1539 |
31.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3207 |
Augustus |
mRNA |
30062 |
34060 |
. |
+ |
. |
ID=Dca31788.1;Parent=Dca31788 |
| scaffold3207 |
Augustus |
exon |
30062 |
30382 |
. |
+ |
. |
ID=Dca31788.1.exon1;Parent=Dca31788.1 |
| scaffold3207 |
Augustus |
exon |
30492 |
30788 |
. |
+ |
. |
ID=Dca31788.1.exon2;Parent=Dca31788.1 |
| scaffold3207 |
Augustus |
exon |
32774 |
34060 |
. |
+ |
. |
ID=Dca31788.1.exon3;Parent=Dca31788.1 |
