Carnation DB

Dca3180.1

Annotation

6-exons
f-1
sp|B9S449_RICCO#Phenazine biosynthesis protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0558860#GO:0003824;GO:0009058#1F1P0C
Repeat List (scaffold11120)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3180.1	13	298	298	60.73	286	63	4e-102
Target_name	Start	End	Length	Cov(%)
sp\|B9S449_RICCO	200	489	489	59.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3180.1	3	298	298	53.02	296	53	5e-86
Target_name	Start	End	Length	Cov(%)
AT4G02860.1	21	313	313	93.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11120	Augus-PASA	mRNA	8799	12910	.	+	.	ID=Dca3180.1;Parent=Dca3180
scaffold11120	Augus-PASA	exon	8799	8834	.	+	.	ID=Dca3180.1.exon1;Parent=Dca3180.1
scaffold11120	Augus-PASA	exon	8933	9130	.	+	.	ID=Dca3180.1.exon2;Parent=Dca3180.1
scaffold11120	Augustus	exon	11020	11328	.	+	.	ID=Dca3180.1.exon3;Parent=Dca3180.1
scaffold11120	Augus-PASA	exon	11436	11597	.	+	.	ID=Dca3180.1.exon4;Parent=Dca3180.1
scaffold11120	Augus-PASA	exon	12644	12727	.	+	.	ID=Dca3180.1.exon5;Parent=Dca3180.1
scaffold11120	Augus-PASA	exon	12803	12910	.	+	.	ID=Dca3180.1.exon6;Parent=Dca3180.1