Carnation DB

Dca3194.1

Annotation

6-exons
f-1
sp|D7MBM0_ARALL#40S ribosomal protein S11#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491674#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold1113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3194.1	1	159	159	88.67	159	89	3e-80
Target_name	Start	End	Length	Cov(%)
sp\|D7MBM0_ARALL	1	159	159	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3194.1	1	159	159	88.67	159	89	5e-74
Target_name	Start	End	Length	Cov(%)
AT5G23740.1	1	159	159	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1113	Augus-PASA	mRNA	18715	21920	.	-	.	ID=Dca3194.1;Parent=Dca3194
scaffold1113	Augus-PASA	exon	18715	18805	.	-	.	ID=Dca3194.1.exon1;Parent=Dca3194.1
scaffold1113	Augus-PASA	exon	19086	19175	.	-	.	ID=Dca3194.1.exon2;Parent=Dca3194.1
scaffold1113	Augus-PASA	exon	19261	19405	.	-	.	ID=Dca3194.1.exon3;Parent=Dca3194.1
scaffold1113	Augus-PASA	exon	21456	21556	.	-	.	ID=Dca3194.1.exon4;Parent=Dca3194.1
scaffold1113	Augus-PASA	exon	21650	21690	.	-	.	ID=Dca3194.1.exon5;Parent=Dca3194.1
scaffold1113	Augus-PASA	exon	21909	21920	.	-	.	ID=Dca3194.1.exon6;Parent=Dca3194.1