Carnation DB

Dca3195.1

Annotation

5-exons
f-1
sp|B9IL16_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_912362#unknown#0F0P0C
Repeat List (scaffold1113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3195.1	52	282	388	38.65	231	58	2e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9IL16_POPTR	121	383	503	52.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3195.1	52	282	388	34.79	231	52	6e-76
Target_name	Start	End	Length	Cov(%)
AT2G25270.1	165	427	545	48.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1113	Augustus	mRNA	24231	29022	.	+	.	ID=Dca3195.1;Parent=Dca3195
scaffold1113	Augustus	exon	24231	24384	.	+	.	ID=Dca3195.1.exon1;Parent=Dca3195.1
scaffold1113	Augustus	exon	27349	27628	.	+	.	ID=Dca3195.1.exon2;Parent=Dca3195.1
scaffold1113	Augustus	exon	27997	28068	.	+	.	ID=Dca3195.1.exon3;Parent=Dca3195.1
scaffold1113	Augustus	exon	28203	28527	.	+	.	ID=Dca3195.1.exon4;Parent=Dca3195.1
scaffold1113	Augustus	exon	28687	29022	.	+	.	ID=Dca3195.1.exon5;Parent=Dca3195.1